MIT Deep Learning Genomics Lecture 14 Deep Learning for Gene Expression Analysis ( Spring20)

Lecture 14 RNA, PCA, tSNE, Embeddings (Spring20) MIT 6. 874 Lecture 14. Spring 2020 Course website: Lecture slides: Today: Predicting gene expression and splicing 0. Review: Expression, unsupervised learning, clustering 1. Upsampling: predict 20, 000 genes from 1000 genes 2. Compressive sensing: Composite measurements 3. DeepChrome+LSTMs: predict expression from chromatin 4. Predicting splicing